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Intron Name: Anas_platyrhynchos_platyrhynchos_3_22209634_22210753_F

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

22209634 - 22210753

Intron Length:

1120

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTC|GTATCCTTA

5'SS Class:

strong_minor

3'SS Sequence:

TCCTGAACTTCAG|A

3'SS Class:

strong_BPS

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

TTATCCTGAACT

Flanking Amino Acid:

CALIFLAVYFIITLSDLECD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

48.1

-0.1

1.4

51.2

42.3

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

71.4

0.48

0.9

66.9

38.3

Minor 5ss

86.9

1.24

1.2

81.6

32.5

Minor BPS

82.4

1.09

1.3

94.42

32.2

Associated Gene:

Gene:

CNIH4

Ensembl Gene ID:

ENSAPLG00000012950

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013479

22209565 - 22216586

7022