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Intron Name: Anas_platyrhynchos_platyrhynchos_3_22243034_22243835_R


Intron Information:

Intron Rank:
7

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
22243034 - 22243835

Intron Length:
802

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AGA|GTAAGATGT

5'SS Class:
major

3'SS Sequence:
TTTTTTTTTAAAG|C

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TCTTCAA

U12 Branch Point Sequence:
TATTCTTCAATT

Flanking Amino Acid:
SRSKLLDKLQTYLPPSVMLP

Intron Amino Acid Position:
240

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71.7
0.51
1.1
66.2
40.6

Major BPS
78.2
0.7
1
79.9
32.6

Major PPT
87.3
0.84
0.9
89.9
23.6

Minor 5ss
40.9
-1
3.1
53
44.8

Minor BPS
72.1
0.77
1.4
85.42
34.8

Associated Gene:

Gene:
WDR26

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

22225340 - 22253388
28049

22225340 - 22253578
28239