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Intron Name: Anas_platyrhynchos_platyrhynchos_3_22244678_22251505_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
22244678 - 22251505

Intron Length:
6828

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GTG|GTAAGAGAC

5'SS Class:
strong_major

3'SS Sequence:
TCTGTCATGTCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTGTCAT

U12 Branch Point Sequence:
TTTCCCCTGACT

Flanking Amino Acid:
ALVHSPHAIVRMKFLLLQQK

Intron Amino Acid Position:
162

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
83
0.78
0.9
71.3
32.5

Major BPS
72.5
0.56
1.2
75
39.9

Major PPT
71.3
0.48
1
70.2
40.1

Minor 5ss
30.9
-2.2
3.4
38.5
41.1

Minor BPS
70.9
0.74
1.7
90.29
32.9

Associated Gene:

Gene:
WDR26

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

22225340 - 22253388
28049

22225340 - 22253578
28239