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Intron Name: Anas_platyrhynchos_platyrhynchos_3_22251563_22251691_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
22251563 - 22251691

Intron Length:
129

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAACGTAG

5'SS Class:
major

3'SS Sequence:
CCAATTTCTGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCTTAT

U12 Branch Point Sequence:
TTTTTCTTATGC

Flanking Amino Acid:
NHVMEGEWDKAENDLNELKA

Intron Amino Acid Position:
143

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.7
0.61
1.2
66.6
41.6

Major BPS
91.4
1.03
0.7
79.9
34.9

Major PPT
75.2
0.57
0.9
69
36.7

Minor 5ss
41.6
-0.9
3.2
55
49.2

Minor BPS
63.4
0.4
1.9
77.51
38.8

Associated Gene:

Gene:
WDR26

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

22225340 - 22253388
28049

22225340 - 22253578
28239