Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_22374477_22375359_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22374477 - 22375359

Intron Length:

883

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAAATGT

5'SS Class:

major

3'SS Sequence:

CTACATCCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTCTTCTACA

Flanking Amino Acid:

NGTKLQYRINGFYAFVLTAA

Intron Amino Acid Position:

290

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

67.6

38.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

69.9

0.45

0.8

66.6

Minor 5ss

39.2

-1.2

3.2

53.4

45.6

Minor BPS

63.5

0.42

1.9

79.64

36.2

Associated Gene:

Gene:

LBR

Ensembl Gene ID:

ENSAPLG00000013563

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022871

22369291 - 22404414

35124

ENSAPLT00000022029

22362245 - 22381489

19245

ENSAPLT00000020121

22367098 - 22380110

13013

ENSAPLT00000030205

22367543 - 22404326

36784

ENSAPLT00000014183

22359295 - 22380110

20816

ENSAPLT00000028481

22369291 - 22381489

12199