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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_22429439_22431042_R

Intron Information:

Intron Rank:
15
Intron Class:
major
Intron Phase:
1
Intron Coordinates:
22429439 - 22431042
Intron Length:
1604

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
ATG|GTAAGTATC
5'SS Class:
strong_major
3'SS Sequence:
TCTTTCTTTCCAG|C
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
TGTTAAT
U12 Branch Point Sequence:
GATTTGTTAATT
Flanking Amino Acid:
LTKLKEELIDAIRQELSKSN
Intron Amino Acid Position:
560

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
90.7
0.96
0.8
87
27.7
Major BPS
84.4
0.85
1
84
34.5
Major PPT
91.6
0.94
0.6
84.4
30.5
Minor 5ss
40.4
-1.1
2.8
51.7
39.2
Minor BPS
60
0.39
2
77.34
39.4

Associated Gene:

Gene:
ENAH
Ensembl Gene ID:
ENSAPLG00000014191
Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000021053
22429258 - 22530010
100753
ENSAPLT00000014885
22429258 - 22530010
100753