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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_22432783_22433531_R

Intron Information:

Intron Rank:
12
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
22432783 - 22433531
Intron Length:
749

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CAG|GTACATATA
5'SS Class:
major
3'SS Sequence:
TTTGTTCCTCCAG|C
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
ATTTAAT
U12 Branch Point Sequence:
TTTAATTTACCT
Flanking Amino Acid:
EGLDYDRLKQLLRSLPLRPY
Intron Amino Acid Position:
503

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
79.9
0.7
1
80.6
33.8
Major BPS
90.7
1.01
0.7
90
19.9
Major PPT
86
0.81
0.8
77.9
36.6
Minor 5ss
37.6
-1.4
3.1
51
45.5
Minor BPS
59.3
0.37
1.8
81.56
40

Associated Gene:

Gene:
ENAH
Ensembl Gene ID:
ENSAPLG00000014191
Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000045667
22432338 - 22514695
82358
ENSAPLT00000028107
22432338 - 22514695
82358