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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_22440124_22444582_R

Intron Information:

Intron Rank:
11
Intron Class:
major
Intron Phase:
1
Intron Coordinates:
22440124 - 22444582
Intron Length:
4459

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CTG|GTAAGTAGC
5'SS Class:
strong_major
3'SS Sequence:
CTGTGTTTCACAG|A
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTTTTAT
U12 Branch Point Sequence:
TAGTTTTTATTT
Flanking Amino Acid:
TSKASSTSTPELTRKPWERT
Intron Amino Acid Position:
471

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
88
0.89
0.9
77.9
36.8
Major BPS
96.5
1.15
0.6
86
34.2
Major PPT
77.3
0.61
0.9
71.5
38.3
Minor 5ss
36.2
-1.6
2.7
42.7
38.4
Minor BPS
58.6
0.35
1.5
71.94
40

Associated Gene:

Gene:
ENAH
Ensembl Gene ID:
ENSAPLG00000014191
Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000028107
22432338 - 22514695
82358
ENSAPLT00000021053
22429258 - 22530010
100753
ENSAPLT00000014885
22429258 - 22530010
100753
ENSAPLT00000045667
22432338 - 22514695
82358