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Intron Name: Anas_platyrhynchos_platyrhynchos_3_22445528_22445800_R


Intron Information:

Intron Rank:
8

Intron Class:
major-like

Intron Phase:
0

Intron Coordinates:
22445528 - 22445800

Intron Length:
273

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CGG|GTAAATGCA

5'SS Class:
major

3'SS Sequence:
GTGTATTGCAAAG|G

3'SS Class:
degenerate_major

U2 Branch Point Sequence:
TTTGCAT

U12 Branch Point Sequence:
TTTGCATGTACA

Flanking Amino Acid:
AGAKLRKVSRGEDSSSSSGG

Intron Amino Acid Position:
392

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.5
0.62
1
68.4
36.8

Major BPS
75
0.62
1.4
85.7
34.9

Major PPT
55.1
0.12
1.2
55.3
43.6

Minor 5ss
31.9
-2.1
3.2
32.7
42.2

Minor BPS
48.3
-0.1
2.2
69.57
42.1

Associated Gene:

Gene:
ENAH

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

22429258 - 22530010
100753

22432338 - 22514695
82358

22432338 - 22514695
82358

22429258 - 22530010
100753