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Intron Name: Anas_platyrhynchos_platyrhynchos_3_22446106_22449878_R


Intron Information:

Intron Rank:
7

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
22446106 - 22449878

Intron Length:
3773

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CTG|GTAAGAATT

5'SS Class:
strong_major

3'SS Sequence:
TCTTTGATACTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTTTGAT

U12 Branch Point Sequence:
AAATCCTTAATA

Flanking Amino Acid:
WERERRISNAGVVQGPPAPP

Intron Amino Acid Position:
290

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
87.2
0.88
0.8
86.3
28.9

Major BPS
84
0.85
0.9
75
39.9

Major PPT
70
0.45
1
63.8
41.6

Minor 5ss
39.6
-1.2
3.2
55.5
42.8

Minor BPS
77.9
0.87
1.1
76.32
34.1

Associated Gene:

Gene:
ENAH

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

22432338 - 22514695
82358

22432338 - 22514695
82358

22429258 - 22530010
100753