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Intron Name: Anas_platyrhynchos_platyrhynchos_3_22470709_22514690_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
22470709 - 22514690

Intron Length:
43982

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTGAGGCGG

5'SS Class:
strong_major

3'SS Sequence:
GTATTTTTAACAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCTAAT

U12 Branch Point Sequence:
GTATTTTTAACA

Flanking Amino Acid:
MSEQSICQARA

Intron Amino Acid Position:
2

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
81.5
0.74
1
60.4
45.8

Major BPS
94.5
1.11
0.6
92.2
14.6

Major PPT
77.4
0.62
1
73.5
40.5

Minor 5ss
24.7
-2.9
3
29.5
43.3

Minor BPS
74.6
0.77
1.1
76.5
34.2

Associated Gene:

Gene:
ENAH

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

22432338 - 22514695
82358

22432338 - 22514695
82358