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Intron Name: Anas_platyrhynchos_platyrhynchos_3_22550224_22552270_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22550224 - 22552270

Intron Length:

2047

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

TTTGTCATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAA

U12 Branch Point Sequence:

AACTTCTTAAAT

Flanking Amino Acid:

EKLYLADPMKVRVVLKYRHC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

63.1

43.4

Major BPS

82.2

0.8

71.9

35.8

Major PPT

84.9

0.79

0.8

82.2

34.1

Minor 5ss

30.3

-2.3

3.3

37.8

47.1

Minor BPS

68.4

0.66

1.4

76.59

39.6

Associated Gene:

Gene:

SRP9

Ensembl Gene ID:

ENSAPLG00000015368

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016004

22550152 - 22554416

4265