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Intron Name: Anas_platyrhynchos_platyrhynchos_3_22562621_22562720_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

22562621 - 22562720

Intron Length:

100

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAGGAGCC

5'SS Class:

major

3'SS Sequence:

TTTTATGTCCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TCTTTTTTATGT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.4

0.25

1.1

54.6

38.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

80.7

0.69

0.9

73.1

41.8

Minor 5ss

31.6

-2.1

3.6

38.7

40.6

Minor BPS

54.9

0.23

1.9

74.38

43.4

Associated Gene:

Gene:

EPHX1

Ensembl Gene ID:

ENSAPLG00000015369

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016042

22562544 - 22582864

20321