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Intron Name: Anas_platyrhynchos_platyrhynchos_3_22614491_22617119_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22614491 - 22617119

Intron Length:

2629

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGGGAT

5'SS Class:

strong_major

3'SS Sequence:

TTTAACTACACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

ACTGTTTTAACT

Flanking Amino Acid:

RPEVAGSYQELSEDVERVSE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

38.2

Major BPS

89.7

0.98

0.7

89.9

Major PPT

71.8

0.49

65.7

39.7

Minor 5ss

29.5

-2.3

3.8

45.4

49.7

Minor BPS

67.6

0.63

1.4

77.06

40.2

Associated Gene:

Gene:

PACC1

Ensembl Gene ID:

ENSAPLG00000015557

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046972

22614178 - 22631257

17080

ENSAPLT00000016230

22614178 - 22633738

19561