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Intron Name: Anas_platyrhynchos_platyrhynchos_3_22617217_22618840_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22617217 - 22618840

Intron Length:

1624

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAACT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTGGTTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TGTGTTTTAAAG

Flanking Amino Acid:

HEDVSSVILPDSELGTSAPS

Intron Amino Acid Position:

130

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.92

0.8

83.3

27.9

Major BPS

90.4

0.7

90.2

19.3

Major PPT

78.4

0.64

69.2

46.1

Minor 5ss

30.7

-2.2

2.9

41.1

44.9

Minor BPS

56.2

0.06

1.6

60.52

41.6

Associated Gene:

Gene:

PACC1

Ensembl Gene ID:

ENSAPLG00000015557

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046972

22614178 - 22631257

17080

ENSAPLT00000016230

22614178 - 22633738

19561