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Intron Name: Anas_platyrhynchos_platyrhynchos_3_22619051_22621136_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22619051 - 22621136

Intron Length:

2086

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

TATCCTGAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTATCCTGAAAC

Flanking Amino Acid:

YKEVSLYDAPGIAFYPGKAQ

Intron Amino Acid Position:

200

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

74.5

41.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

63.6

0.31

1.1

58.8

40.7

Minor 5ss

-1.4

47.2

42.5

Minor BPS

69.8

0.6

1.5

78.18

36.5

Associated Gene:

Gene:

PACC1

Ensembl Gene ID:

ENSAPLG00000015557

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046972

22614178 - 22631257

17080

ENSAPLT00000016230

22614178 - 22633738

19561