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Intron Name: Anas_platyrhynchos_platyrhynchos_3_22622992_22628328_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22622992 - 22628328

Intron Length:

5337

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCCTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTAAT

U12 Branch Point Sequence:

TGGTCAGTAAAG

Flanking Amino Acid:

LFSSFQEFINSPEKAEFMKD

Intron Amino Acid Position:

299

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.8

26.2

Major BPS

67.8

0.44

1.1

67.7

36.5

Major PPT

90.2

0.9

0.6

89.9

18.2

Minor 5ss

41.1

-1

2.5

50.4

46.1

Minor BPS

-0.5

2.3

54.74

45.7

Associated Gene:

Gene:

PACC1

Ensembl Gene ID:

ENSAPLG00000015557

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046972

22614178 - 22631257

17080

ENSAPLT00000016230

22614178 - 22633738

19561