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Intron Name: Anas_platyrhynchos_platyrhynchos_3_22628474_22630819_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22628474 - 22630819

Intron Length:

2346

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAGATA

5'SS Class:

strong_major

3'SS Sequence:

CCCCCTCTCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

CCTTTTTCACCT

Flanking Amino Acid:

GSETVEFKQETSVVNYIDQR

Intron Amino Acid Position:

348

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.78

0.9

81.1

32.6

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

72.7

0.51

0.8

31.1

Minor 5ss

35.2

-1.7

3.3

48.1

47.6

Minor BPS

48.9

-0

1.8

66.64

44.9

Associated Gene:

Gene:

PACC1

Ensembl Gene ID:

ENSAPLG00000015557

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046972

22614178 - 22631257

17080

ENSAPLT00000016230

22614178 - 22633738

19561