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Intron Name: Anas_platyrhynchos_platyrhynchos_3_22643726_22646107_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22643726 - 22646107

Intron Length:

2382

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCTTT

5'SS Class:

strong_major

3'SS Sequence:

AATTACATTCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATCAT

U12 Branch Point Sequence:

TCTGTTTAAACT

Flanking Amino Acid:

AKGLALFHAQLAYCVVQFLE

Intron Amino Acid Position:

282

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.4

0.8

87.9

29.3

Major BPS

80.4

0.76

80.3

31.8

Major PPT

0.38

56.8

43.2

Minor 5ss

49.8

-0

2.8

73.2

43.7

Minor BPS

56.8

0.29

1.8

74.22

43.6

Associated Gene:

Gene:

PPP2R5A

Ensembl Gene ID:

ENSAPLG00000015734

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019661

22635256 - 22669642

34387

ENSAPLT00000019511

22635219 - 22662411

27193

ENSAPLT00000016430

22629636 - 22677249

47614

ENSAPLT00000041184

22635163 - 22677249

42087