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Intron Name: Anas_platyrhynchos_platyrhynchos_3_2268833_2270161_R


Intron Information:

Intron Rank:
26

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
2268833 - 2270161

Intron Length:
1329

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTAATGGCA

5'SS Class:
major

3'SS Sequence:
TGCCATATGCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTACAT

U12 Branch Point Sequence:
TTTACATGAATA

Flanking Amino Acid:
VIAERRSHLEVVHWAIPFSN

Intron Amino Acid Position:
1281

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79
0.68
1
68.6
36.2

Major BPS
82.7
0.81
0.9
89.3
26.1

Major PPT
62.3
0.28
1.1
54.5
44.4

Minor 5ss
29.6
-2.3
3.4
39.3
46

Minor BPS
59.5
0.29
1.7
74.75
36.2

Associated Gene:

Gene:
KIF16B

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

2268680 - 2394027
125348