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Intron Name: Anas_platyrhynchos_platyrhynchos_3_22719050_22723220_R


Intron Information:

Intron Rank:
13

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
22719050 - 22723220

Intron Length:
4171

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAAGGCCC

5'SS Class:
strong_major

3'SS Sequence:
TCTCCTCTACCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TACTTAT

U12 Branch Point Sequence:
TTCTCCTCTACC

Flanking Amino Acid:
TQKKTEHRGAGSPSSLQNTP

Intron Amino Acid Position:
423

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
87.6
0.89
0.9
71.3
37.2

Major BPS
83.6
0.84
0.8
71.9
35.8

Major PPT
76.8
0.6
0.9
70.2
35.1

Minor 5ss
32
-2.1
3.3
42.6
44.4

Minor BPS
62.1
0.36
1.9
75.26
41.3

Associated Gene:

Gene:
DTL

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

22716595 - 22738636
22042

22716595 - 22738811
22217