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Intron Name: Anas_platyrhynchos_platyrhynchos_3_22723357_22725142_R


Intron Information:

Intron Rank:
12

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
22723357 - 22725142

Intron Length:
1786

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTTTGTTTT

5'SS Class:
major

3'SS Sequence:
ACTTCTGTTGCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATTGCAA

U12 Branch Point Sequence:
ATTGCAACAAAC

Flanking Amino Acid:
IAWCPSDFTKIATCSDDNTV

Intron Amino Acid Position:
378

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78.7
0.68
1.1
81.7
32.3

Major BPS
57
0.18
1.3
69.4
37.7

Major PPT
79.1
0.66
0.9
72.9
36.7

Minor 5ss
48.6
-0.1
2.4
67.6
43.4

Minor BPS
42.1
-0.6
2.1
57.1
40.6

Associated Gene:

Gene:
DTL

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

22716595 - 22738636
22042

22716595 - 22738811
22217