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Intron Name: Anas_platyrhynchos_platyrhynchos_3_22732167_22733146_R


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
22732167 - 22733146

Intron Length:
980

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TGG|GTAAGTTAT

5'SS Class:
strong_major

3'SS Sequence:
TTCTTGTCTTTAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTCTTAC

U12 Branch Point Sequence:
ATTCTCTAAATT

Flanking Amino Acid:
CYPGTSTRKLGYSSLVLDST

Intron Amino Acid Position:
275

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
88.4
0.91
0.9
84
30.2

Major BPS
81.5
0.78
0.9
71.6
36.1

Major PPT
82.4
0.73
0.8
81.2
30.9

Minor 5ss
41.4
-1
2.9
49.9
46.4

Minor BPS
62.8
0.48
1.6
79.24
37.1

Associated Gene:

Gene:
DTL

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

22716595 - 22738636
22042

22716595 - 22738811
22217