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Intron Name: Anas_platyrhynchos_platyrhynchos_3_22733251_22734187_R


Intron Information:

Intron Rank:
8

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
22733251 - 22734187

Intron Length:
937

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TGG|GTAAGGAAG

5'SS Class:
strong_major

3'SS Sequence:
TTTTATATTTCAG|C

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTATAT

U12 Branch Point Sequence:
TGTGCTTTTATA

Flanking Amino Acid:
HTLISAGAVDGVIKVWDLRK

Intron Amino Acid Position:
240

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
80.4
0.72
1
69.6
42.7

Major BPS
79.2
0.73
1
75.3
39.4

Major PPT
88.1
0.86
0.8
86
32.8

Minor 5ss
31.2
-2.2
3.1
31.4
42.6

Minor BPS
56.1
0.18
1.7
67.32
39.4

Associated Gene:

Gene:
DTL

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

22716595 - 22738811
22217

22716595 - 22738636
22042