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Intron Name: Anas_platyrhynchos_platyrhynchos_3_22748337_22748947_F


Intron Information:

Intron Rank:
11

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
22748337 - 22748947

Intron Length:
611

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TTG|GTAAGACCT

5'SS Class:
strong_major

3'SS Sequence:
TACTCTTCACTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
AATCCAC

U12 Branch Point Sequence:
TCTTCCTCCATC

Flanking Amino Acid:
SATDKKQELLVSLATVIFVS

Intron Amino Acid Position:
644

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
82.5
0.77
0.9
70.8
39.2

Major BPS
50.8
0.02
1.2
62.2
34.6

Major PPT
69.3
0.43
0.9
63.4
37.8

Minor 5ss
34.7
-1.7
3.2
46.8
42.3

Minor BPS
56.4
0.18
2
70.19
41.8

Associated Gene:

Gene:
INTS7

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

22738608 - 22759659
21052

22738608 - 22779381
40774

22738608 - 22759636
21029

22738608 - 22779381
40774

22738608 - 22759792
21185