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Intron Name: Anas_platyrhynchos_platyrhynchos_3_22814656_22817654_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22814656 - 22817654

Intron Length:

2999

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATAGA

5'SS Class:

strong_major

3'SS Sequence:

TTTATTCTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTCAT

U12 Branch Point Sequence:

AATGTTTTATTC

Flanking Amino Acid:

LIHGDFFIRQGKAHRDQQLV

Intron Amino Acid Position:

161

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

80.4

34.2

Major BPS

79.8

0.74

0.9

81.3

29.9

Major PPT

86.7

0.83

0.7

85.7

28.9

Minor 5ss

34.4

-1.8

2.8

42.8

Minor BPS

48.8

-0.1

1.6

56.69

36.6

Associated Gene:

Gene:

LPGAT1

Ensembl Gene ID:

ENSAPLG00000010836

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047457

22782120 - 22844564

62445

ENSAPLT00000011281

22782120 - 22870750

88631