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Intron Name: Anas_platyrhynchos_platyrhynchos_3_22838799_22842949_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22838799 - 22842949

Intron Length:

4151

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGATGG

5'SS Class:

major

3'SS Sequence:

TTTTCTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTGAA

U12 Branch Point Sequence:

AAAGCATTACCT

Flanking Amino Acid:

EDLLTHFYETGAFPPLQGQT

Intron Amino Acid Position:

330

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

63.4

43.8

Major BPS

59.7

0.24

1.2

52.7

43.2

Major PPT

96.8

1.05

0.5

96.1

13.2

Minor 5ss

35.9

-1.6

3.3

47.1

48.3

Minor BPS

48.3

-0

65.87

44.1

Associated Gene:

Gene:

LPGAT1

Ensembl Gene ID:

ENSAPLG00000010836

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047457

22782120 - 22844564

62445

ENSAPLT00000011281

22782120 - 22870750

88631