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Intron Name: Anas_platyrhynchos_platyrhynchos_3_22876459_22877418_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

22876459 - 22877418

Intron Length:

960

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGC|GTATGATAT

5'SS Class:

weak_major

3'SS Sequence:

TTTCTACTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

ATATTTCTACTT

Flanking Amino Acid:

AIKDREQRLEQRERELCVRE

Intron Amino Acid Position:

366

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.6

0.2

1.3

61.3

40.1

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

86.3

0.82

0.8

35.4

Minor 5ss

46.6

-0.3

2.9

59.9

45.1

Minor BPS

47.6

-0.1

1.8

38.3

Associated Gene:

Gene:

NEK2

Ensembl Gene ID:

ENSAPLG00000010876

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011362

22872113 - 22880389

8277