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Intron Name: Anas_platyrhynchos_platyrhynchos_3_22972242_22972752_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

22972242 - 22972752

Intron Length:

511

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGACAG

5'SS Class:

strong_major

3'SS Sequence:

ATTAACTGGGAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCCAAT

U12 Branch Point Sequence:

ATGGCATTAACT

Flanking Amino Acid:

KNSNLMVSTQALASHLDKSA

Intron Amino Acid Position:

310

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

67.7

39.3

Major BPS

71.8

0.54

1.2

32.5

Major PPT

49.2

-0

1.2

49.5

43.2

Minor 5ss

25.9

-2.8

2.9

29.3

43.4

Minor BPS

64.9

0.54

1.7

79.61

42.2

Associated Gene:

Gene:

TRAF5

Ensembl Gene ID:

ENSAPLG00000006555

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006848

22970255 - 22980022

9768