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Intron Name: Anas_platyrhynchos_platyrhynchos_3_22973639_22973913_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

22973639 - 22973913

Intron Length:

275

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTGTTC

5'SS Class:

major

3'SS Sequence:

CTGCCTCACTAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TATTCTTTCACT

Flanking Amino Acid:

PYKQYGCLIKVKRGKLAEHE

Intron Amino Acid Position:

232

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.4

0.51

1.1

66.9

39.5

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

56.6

0.15

1.1

60.4

34.6

Minor 5ss

40.3

-1.1

3.5

45.8

Minor BPS

73.4

0.82

1.7

88.93

35.9

Associated Gene:

Gene:

TRAF5

Ensembl Gene ID:

ENSAPLG00000006555

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006848

22970255 - 22980022

9768