Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2308332 - 2308865

Intron Length:

534

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCAGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTGTTCTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

ACTTTATTAAAT

Flanking Amino Acid:

SLFWSTESFKDNERLNNGTV

Intron Amino Acid Position:

1154

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

77.8

38.7

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

0.79

0.7

84.8

Minor 5ss

35.7

-1.6

48.8

Minor BPS

60.8

0.42

1.7

76.55

39.6

Associated Gene:

Gene:

KIF16B

Ensembl Gene ID:

ENSAPLG00000012639

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022300

2268680 - 2394027

125348

ENSAPLT00000031256

2254285 - 2394027

139743

ENSAPLT00000020499

2254285 - 2394027

139743

ENSAPLT00000030926

2254285 - 2394027

139743

ENSAPLT00000041001

2292319 - 2394027

101709

ENSAPLT00000013213

2253568 - 2394027

140460

ENSAPLT00000026847

2254285 - 2394027

139743

ENSAPLT00000040072

2253568 - 2394027

140460

ENSAPLT00000023573

2304660 - 2394027

89368

ENSAPLT00000034829

2254285 - 2394027

139743

Intron Name: Anas_platyrhynchos_platyrhynchos_3_2308332_2308865_R

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: