Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2308972 - 2309812

Intron Length:

841

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAGGTAAC

5'SS Class:

strong_major

3'SS Sequence:

CTATGTCTTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

ATTTGCTTCATA

Flanking Amino Acid:

QPPCAPLVDDRINAFIEQEV

Intron Amino Acid Position:

1118

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.5

0.88

0.9

81.4

32.7

Major BPS

88.7

0.96

0.8

36.5

Major PPT

75.1

0.57

0.9

36.9

Minor 5ss

34.6

-1.7

44.4

43.7

Minor BPS

55.9

0.18

2.2

73.28

39.2

Associated Gene:

Gene:

KIF16B

Ensembl Gene ID:

ENSAPLG00000012639

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023573

2304660 - 2394027

89368

ENSAPLT00000034829

2254285 - 2394027

139743

ENSAPLT00000022300

2268680 - 2394027

125348

ENSAPLT00000031256

2254285 - 2394027

139743

ENSAPLT00000020499

2254285 - 2394027

139743

ENSAPLT00000030926

2254285 - 2394027

139743

ENSAPLT00000041001

2292319 - 2394027

101709

ENSAPLT00000013213

2253568 - 2394027

140460

ENSAPLT00000026847

2254285 - 2394027

139743

ENSAPLT00000040072

2253568 - 2394027

140460

Intron Name: Anas_platyrhynchos_platyrhynchos_3_2308972_2309812_R

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: