Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2309972 - 2315475

Intron Length:

5504

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

GATACCTTTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAA

U12 Branch Point Sequence:

TACATTTTAAGA

Flanking Amino Acid:

EQKALEQDRERLDQEIQQLK

Intron Amino Acid Position:

1065

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.1

0.92

0.9

85.6

31.2

Major BPS

78.5

0.71

0.9

69.7

37.1

Major PPT

73.8

0.53

65.9

40.4

Minor 5ss

39.1

-1.2

3.4

45.5

Minor BPS

52.3

0.07

1.6

60.18

40.2

Associated Gene:

Gene:

KIF16B

Ensembl Gene ID:

ENSAPLG00000012639

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013213

2253568 - 2394027

140460

ENSAPLT00000026847

2254285 - 2394027

139743

ENSAPLT00000040072

2253568 - 2394027

140460

ENSAPLT00000023573

2304660 - 2394027

89368

ENSAPLT00000034829

2254285 - 2394027

139743

ENSAPLT00000022300

2268680 - 2394027

125348

ENSAPLT00000031256

2254285 - 2394027

139743

ENSAPLT00000020499

2254285 - 2394027

139743

ENSAPLT00000030926

2254285 - 2394027

139743

ENSAPLT00000041001

2292319 - 2394027

101709

Intron Name: Anas_platyrhynchos_platyrhynchos_3_2309972_2315475_R

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: