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Intron Name: Anas_platyrhynchos_platyrhynchos_3_23229625_23271348_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23229625 - 23271348

Intron Length:

41724

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTACTGTGA

5'SS Class:

major

3'SS Sequence:

TTTCTATTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATTAT

U12 Branch Point Sequence:

TTTCTATTTACA

Flanking Amino Acid:

LLILICFPARWLAVGNTDCS

Intron Amino Acid Position:

162

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.4

0.27

1.1

52.3

41.1

Major BPS

76.9

0.67

66.3

40.4

Major PPT

89.7

0.89

0.7

84.3

29.4

Minor 5ss

35.2

-1.7

3.4

44.5

45.2

Minor BPS

55.4

0.16

1.9

73.94

36.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029050

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027399

23229372 - 23313380

84009

ENSAPLT00000027028

23229372 - 23350376

121005