Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2326428 - 2326617

Intron Length:

190

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGTAA

5'SS Class:

strong_major

3'SS Sequence:

GGTCTGTTGTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

GTTTGTCTAATA

Flanking Amino Acid:

EAAKLREKRKSGLLSSFSLS

Intron Amino Acid Position:

566

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.8

28.8

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

0.29

1.1

61.7

44.5

Minor 5ss

30.6

-2.2

3.2

37.1

47.5

Minor BPS

50.7

0.02

68.43

38.4

Associated Gene:

Gene:

KIF16B

Ensembl Gene ID:

ENSAPLG00000012639

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030926

2254285 - 2394027

139743

ENSAPLT00000041001

2292319 - 2394027

101709

ENSAPLT00000020499

2254285 - 2394027

139743

ENSAPLT00000026847

2254285 - 2394027

139743

ENSAPLT00000040072

2253568 - 2394027

140460

ENSAPLT00000013213

2253568 - 2394027

140460

ENSAPLT00000023573

2304660 - 2394027

89368

ENSAPLT00000034829

2254285 - 2394027

139743

ENSAPLT00000022300

2268680 - 2394027

125348

ENSAPLT00000031256

2254285 - 2394027

139743

Intron Name: Anas_platyrhynchos_platyrhynchos_3_2326428_2326617_R

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: