Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2332716 - 2333273

Intron Length:

558

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATACA

5'SS Class:

strong_major

3'SS Sequence:

CCTTTTTAATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

TCCTTTTTAATT

Flanking Amino Acid:

STGIILYHLKEGQTYVGRED

Intron Amino Acid Position:

475

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

83.1

28.6

Major BPS

87.3

0.93

0.8

36.5

Major PPT

0.52

0.9

74.5

Minor 5ss

35.4

-1.7

2.7

43.5

43.6

Minor BPS

71.7

0.76

1.2

78.3

39.3

Associated Gene:

Gene:

KIF16B

Ensembl Gene ID:

ENSAPLG00000012639

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023573

2304660 - 2394027

89368

ENSAPLT00000034829

2254285 - 2394027

139743

ENSAPLT00000022300

2268680 - 2394027

125348

ENSAPLT00000031256

2254285 - 2394027

139743

ENSAPLT00000020499

2254285 - 2394027

139743

ENSAPLT00000030926

2254285 - 2394027

139743

ENSAPLT00000041001

2292319 - 2394027

101709

ENSAPLT00000013213

2253568 - 2394027

140460

ENSAPLT00000026847

2254285 - 2394027

139743

ENSAPLT00000040072

2253568 - 2394027

140460

Intron Name: Anas_platyrhynchos_platyrhynchos_3_2332716_2333273_R

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: