Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2333394 - 2358484

Intron Length:

25091

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGGCAA

5'SS Class:

major

3'SS Sequence:

TTGTCCTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATTTTAATAACT

Flanking Amino Acid:

KWNETQNILKEQTLALRKEG

Intron Amino Acid Position:

435

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

68.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

85.9

0.81

0.8

80.2

31.9

Minor 5ss

31.8

-2.1

3.3

38.6

40.8

Minor BPS

61.7

0.45

1.9

84.59

35.1

Associated Gene:

Gene:

KIF16B

Ensembl Gene ID:

ENSAPLG00000012639

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013213

2253568 - 2394027

140460

ENSAPLT00000026847

2254285 - 2394027

139743

ENSAPLT00000040072

2253568 - 2394027

140460

ENSAPLT00000023573

2304660 - 2394027

89368

ENSAPLT00000034829

2254285 - 2394027

139743

ENSAPLT00000022300

2268680 - 2394027

125348

ENSAPLT00000031256

2254285 - 2394027

139743

ENSAPLT00000020499

2254285 - 2394027

139743

ENSAPLT00000030926

2254285 - 2394027

139743

ENSAPLT00000041001

2292319 - 2394027

101709

Intron Name: Anas_platyrhynchos_platyrhynchos_3_2333394_2358484_R

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: