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Intron Name: Anas_platyrhynchos_platyrhynchos_3_23487135_23488974_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
23487135 - 23488974

Intron Length:
1840

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTAAATGAA

5'SS Class:
strong_major

3'SS Sequence:
TCTTCTTCTTCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
AATAAAT

U12 Branch Point Sequence:
AAATAAATAAAT

Flanking Amino Acid:
SDSTAVLSPEDMSARGSSSQ

Intron Amino Acid Position:
241

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
86.9
0.87
0.9
80
27.6

Major BPS
65.7
0.39
1
71.3
30.3

Major PPT
90
0.9
0.6
88.5
21

Minor 5ss
31.4
-2.1
3.2
39.9
46.1

Minor BPS
43.9
-0.3
2
62.13
40.1

Associated Gene:

Gene:
SYT14

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

23468339 - 23534946
66608

23468339 - 23534946
66608