Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2358545 - 2361637

Intron Length:

3093

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTTAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAG

U12 Branch Point Sequence:

TTTTCTTTTATA

Flanking Amino Acid:

EEKLQQNEARVQELTKEWTN

Intron Amino Acid Position:

415

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

0.9

80.1

30.7

Major BPS

0.65

1.5

85.7

34.9

Major PPT

91.5

0.93

0.6

Minor 5ss

-1.6

2.9

40.8

45.4

Minor BPS

72.9

0.71

1.5

82.82

31.5

Associated Gene:

Gene:

KIF16B

Ensembl Gene ID:

ENSAPLG00000012639

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022300

2268680 - 2394027

125348

ENSAPLT00000031256

2254285 - 2394027

139743

ENSAPLT00000041001

2292319 - 2394027

101709

ENSAPLT00000020499

2254285 - 2394027

139743

ENSAPLT00000030926

2254285 - 2394027

139743

ENSAPLT00000040072

2253568 - 2394027

140460

ENSAPLT00000013213

2253568 - 2394027

140460

ENSAPLT00000026847

2254285 - 2394027

139743

ENSAPLT00000023573

2304660 - 2394027

89368

ENSAPLT00000034829

2254285 - 2394027

139743

Intron Name: Anas_platyrhynchos_platyrhynchos_3_2358545_2361637_R

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: