Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2361704 - 2364554

Intron Length:

2851

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGCTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTATGATTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

GTTTCTCTAACT

Flanking Amino Acid:

LKALLAQGNQIALLDSPTAL

Intron Amino Acid Position:

393

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

1.1

79.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

77.3

0.61

0.9

74.8

39.8

Minor 5ss

46.1

-0.4

2.8

65.3

45.9

Minor BPS

73.2

0.81

1.6

89.66

34.2

Associated Gene:

Gene:

KIF16B

Ensembl Gene ID:

ENSAPLG00000012639

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022300

2268680 - 2394027

125348

ENSAPLT00000031256

2254285 - 2394027

139743

ENSAPLT00000020499

2254285 - 2394027

139743

ENSAPLT00000030926

2254285 - 2394027

139743

ENSAPLT00000041001

2292319 - 2394027

101709

ENSAPLT00000013213

2253568 - 2394027

140460

ENSAPLT00000026847

2254285 - 2394027

139743

ENSAPLT00000040072

2253568 - 2394027

140460

ENSAPLT00000023573

2304660 - 2394027

89368

ENSAPLT00000034829

2254285 - 2394027

139743

Intron Name: Anas_platyrhynchos_platyrhynchos_3_2361704_2364554_R

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: