Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2368022 - 2369376

Intron Length:

1355

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAACAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

AATGCTTTAATG

Flanking Amino Acid:

HAIFTINFTQAKFDSEMPCE

Intron Amino Acid Position:

234

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

70.2

35.7

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

95.8

1.03

0.5

96.6

11.7

Minor 5ss

30.6

-2.2

3.1

38.6

46.4

Minor BPS

63.6

0.29

1.4

62.51

Associated Gene:

Gene:

KIF16B

Ensembl Gene ID:

ENSAPLG00000012639

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023573

2304660 - 2394027

89368

ENSAPLT00000034829

2254285 - 2394027

139743

ENSAPLT00000022300

2268680 - 2394027

125348

ENSAPLT00000031256

2254285 - 2394027

139743

ENSAPLT00000020499

2254285 - 2394027

139743

ENSAPLT00000030926

2254285 - 2394027

139743

ENSAPLT00000041001

2292319 - 2394027

101709

ENSAPLT00000013213

2253568 - 2394027

140460

ENSAPLT00000026847

2254285 - 2394027

139743

ENSAPLT00000040072

2253568 - 2394027

140460

Intron Name: Anas_platyrhynchos_platyrhynchos_3_2368022_2369376_R

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: