Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2369520 - 2370160

Intron Length:

641

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAAAACC

5'SS Class:

major

3'SS Sequence:

TACTCTTCTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTAAC

U12 Branch Point Sequence:

CATACTGTAACA

Flanking Amino Acid:

EHPKEGPYVEDLSKHLVQNY

Intron Amino Acid Position:

186

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.1

65.8

38.4

Major BPS

62.2

0.3

1.2

38.7

Major PPT

83.3

0.75

0.8

30.6

Minor 5ss

33.7

-1.9

36.6

40.3

Minor BPS

51.5

0.04

2.1

64.85

41.7

Associated Gene:

Gene:

KIF16B

Ensembl Gene ID:

ENSAPLG00000012639

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022300

2268680 - 2394027

125348

ENSAPLT00000031256

2254285 - 2394027

139743

ENSAPLT00000020499

2254285 - 2394027

139743

ENSAPLT00000030926

2254285 - 2394027

139743

ENSAPLT00000041001

2292319 - 2394027

101709

ENSAPLT00000013213

2253568 - 2394027

140460

ENSAPLT00000026847

2254285 - 2394027

139743

ENSAPLT00000040072

2253568 - 2394027

140460

ENSAPLT00000023573

2304660 - 2394027

89368

ENSAPLT00000034829

2254285 - 2394027

139743

Intron Name: Anas_platyrhynchos_platyrhynchos_3_2369520_2370160_R

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: