Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2370271 - 2370778

Intron Length:

508

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTTCTT

5'SS Class:

major

3'SS Sequence:

CTTTTTCTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAC

U12 Branch Point Sequence:

GTTTTCTGACCT

Flanking Amino Acid:

RNEASFRTEVSYLEIYNERV

Intron Amino Acid Position:

149

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

1.1

74.8

41.3

Major BPS

81.4

0.78

0.9

71.3

36.7

Major PPT

93.6

0.98

0.6

92.3

Minor 5ss

39.2

-1.2

3.3

59.3

45.1

Minor BPS

61.8

0.45

1.8

81.31

40.1

Associated Gene:

Gene:

KIF16B

Ensembl Gene ID:

ENSAPLG00000012639

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013213

2253568 - 2394027

140460

ENSAPLT00000026847

2254285 - 2394027

139743

ENSAPLT00000040072

2253568 - 2394027

140460

ENSAPLT00000023573

2304660 - 2394027

89368

ENSAPLT00000034829

2254285 - 2394027

139743

ENSAPLT00000022300

2268680 - 2394027

125348

ENSAPLT00000031256

2254285 - 2394027

139743

ENSAPLT00000020499

2254285 - 2394027

139743

ENSAPLT00000030926

2254285 - 2394027

139743

ENSAPLT00000041001

2292319 - 2394027

101709

Intron Name: Anas_platyrhynchos_platyrhynchos_3_2370271_2370778_R

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: