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Intron Name: Anas_platyrhynchos_platyrhynchos_3_2374802_2379379_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2374802 - 2379379

Intron Length:

4578

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAGGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTGTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTCAA

U12 Branch Point Sequence:

TTGTCTTCAAAA

Flanking Amino Acid:

KSPSFVCQETVFKNLGTDVL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

79.1

37.5

Major BPS

78.2

0.7

79.9

32.6

Major PPT

84.7

0.78

0.8

80.6

31.5

Minor 5ss

45.2

-0.5

3.2

44.2

Minor BPS

62.5

0.39

1.6

72.86

39.1

Associated Gene:

Gene:

KIF16B

Ensembl Gene ID:

ENSAPLG00000012639

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013213

2253568 - 2394027

140460

ENSAPLT00000030926

2254285 - 2394027

139743

ENSAPLT00000041001

2292319 - 2394027

101709

ENSAPLT00000023573

2304660 - 2394027

89368

ENSAPLT00000040072

2253568 - 2394027

140460

ENSAPLT00000022300

2268680 - 2394027

125348

ENSAPLT00000034829

2254285 - 2394027

139743

ENSAPLT00000020499

2254285 - 2394027

139743

ENSAPLT00000031256

2254285 - 2394027

139743