Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2379494 - 2380473

Intron Length:

980

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TATTTTTTATTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTCAT

U12 Branch Point Sequence:

ATCTCTTTATTT

Flanking Amino Acid:

KNKTTITNLKIPEGGTGDTG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.6

1.03

0.7

88.4

18.8

Major BPS

86.1

0.9

0.7

85.7

22.9

Major PPT

81.3

0.7

0.8

82.6

33.4

Minor 5ss

29.6

-2.3

2.6

32.7

42.2

Minor BPS

64.9

0.55

1.6

77.64

39.7

Associated Gene:

Gene:

KIF16B

Ensembl Gene ID:

ENSAPLG00000012639

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013213

2253568 - 2394027

140460

ENSAPLT00000026847

2254285 - 2394027

139743

ENSAPLT00000040072

2253568 - 2394027

140460

ENSAPLT00000023573

2304660 - 2394027

89368

ENSAPLT00000034829

2254285 - 2394027

139743

ENSAPLT00000022300

2268680 - 2394027

125348

ENSAPLT00000031256

2254285 - 2394027

139743

ENSAPLT00000020499

2254285 - 2394027

139743

ENSAPLT00000030926

2254285 - 2394027

139743

ENSAPLT00000041001

2292319 - 2394027

101709

Intron Name: Anas_platyrhynchos_platyrhynchos_3_2379494_2380473_R

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: