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Intron Name: Anas_platyrhynchos_platyrhynchos_3_24043467_24043978_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

24043467 - 24043978

Intron Length:

512

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TGG|GCAAAGACC

5'SS Class:

major

3'SS Sequence:

CGTCAGGCGTGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GCGTCAG

U12 Branch Point Sequence:

CCCGCGTCAGGC

Flanking Amino Acid:

WRLQAAGVYLGKMSAPNMQE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.4

0.46

1.2

72.3

35.4

Major BPS

42.3

-0.4

1.7

47.8

Major PPT

42.9

-0.4

1.7

42.4

42.9

Minor 5ss

22.1

-3.2

3.8

26.6

36.6

Minor BPS

31.9

-1.3

2.3

33.11

42.3

Associated Gene:

Gene:

COA6

Ensembl Gene ID:

ENSAPLG00000022615

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025519

24043172 - 24045079

1908