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Intron Name: Anas_platyrhynchos_platyrhynchos_3_24050647_24051924_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24050647 - 24051924

Intron Length:

1278

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAG|GCAAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

TGTTACATTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAT

U12 Branch Point Sequence:

CTGCTAATAATA

Flanking Amino Acid:

FHPLEDYSLETIFYTLPRLS

Intron Amino Acid Position:

975

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.4

1.14

0.7

87.9

27.4

Major BPS

0.75

78.6

Major PPT

77.8

0.63

0.9

70.8

39.4

Minor 5ss

26.5

-2.7

3.8

42.1

44.5

Minor BPS

45.1

-0.3

1.8

54.3

38.4

Associated Gene:

Gene:

TARBP1

Ensembl Gene ID:

ENSAPLG00000007666

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007987

24046224 - 24079762

33539

ENSAPLT00000007982

24046322 - 24079240

32919