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Intron Name: Anas_platyrhynchos_platyrhynchos_3_24053909_24055152_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24053909 - 24055152

Intron Length:

1244

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTAAGTAAG

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTCCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAC

U12 Branch Point Sequence:

ACTTTGGAAAAT

Flanking Amino Acid:

LSKFWDCFCYDEEKLKTSIC

Intron Amino Acid Position:

853

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

34.8

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

86.1

0.81

0.6

85.6

21.8

Minor 5ss

37.5

-1.4

2.8

41.7

Minor BPS

37.5

-0.8

2.6

58.22

45.1

Associated Gene:

Gene:

TARBP1

Ensembl Gene ID:

ENSAPLG00000007666

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007987

24046224 - 24079762

33539

ENSAPLT00000007982

24046322 - 24079240

32919