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Intron Name: Anas_platyrhynchos_platyrhynchos_3_24056293_24057765_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24056293 - 24057765

Intron Length:

1473

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGCTTC

5'SS Class:

strong_major

3'SS Sequence:

AACTTGCTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

CAATTTCTAACT

Flanking Amino Acid:

EDIVSKLLDKDEQVSRSKTR

Intron Amino Acid Position:

766

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

34.8

Major BPS

90.4

0.7

90.2

19.3

Major PPT

74.5

0.55

0.9

69.9

40.6

Minor 5ss

50.5

0.02

2.7

68.2

36.7

Minor BPS

55.4

0.25

1.7

70.11

40.8

Associated Gene:

Gene:

TARBP1

Ensembl Gene ID:

ENSAPLG00000007666

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007987

24046224 - 24079762

33539

ENSAPLT00000007982

24046322 - 24079240

32919