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Intron Name: Anas_platyrhynchos_platyrhynchos_3_24057887_24058836_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

24057887 - 24058836

Intron Length:

950

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGTATC

5'SS Class:

strong_major

3'SS Sequence:

TAATATTTTACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTATTAATA

Flanking Amino Acid:

EKCAANVVTESTNRDDHYVR

Intron Amino Acid Position:

725

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.9

85.4

31.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

79.5

0.66

0.9

72.9

41.4

Minor 5ss

39.2

-1.2

43.2

Minor BPS

74.3

0.76

1.5

84.09

29.2

Associated Gene:

Gene:

TARBP1

Ensembl Gene ID:

ENSAPLG00000007666

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007987

24046224 - 24079762

33539

ENSAPLT00000007982

24046322 - 24079240

32919